BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028F06LP1|AL428939
(870 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1043 1714 0.0
>3x_Contig1043
Length = 5132
Score = 1714 bits (864), Expect = 0.0
Identities = 868/870 (99%)
Strand = Plus / Plus
Query: 1 gatctattaatctcatcgaatcatcacctttcttctcattttgcgcttttgtttgtgcta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3001 gatctattaatctcatcgaatcatcacctttcttctcattttgcgcttttgtttgtgcta 3060
Query: 61 tccagtgcaattacggttcaaatttccctttcatggaccctgacgcagctttatataaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3061 tccagtgcaattacggttcaaatttccctttcatggaccctgacgcagctttatataaga 3120
Query: 121 wgaataaagacaaaaatctatcatattgctataaaatggtattaaagattctcaagtcaa 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3121 agaataaagacaaaaatctatcatattgctataaaatggtattaaagattctcaagtcaa 3180
Query: 181 gggagagtttttgcccagtcactaagaactggttgcatatggttttcaaagttcaggaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3181 gggagagtttttgcccagtcactaagaactggttgcatatggttttcaaagttcaggaga 3240
Query: 241 tgtataaatctgttgctggtagcaggactagcagcaaggtagtcccgaacggctcagaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3241 tgtataaatctgttgctggtagcaggactagcagcaaggtagtcccgaacggctcagaac 3300
Query: 301 aaacccagacttatgttcctatccagccgacaattttgaatcctaattcatctcaaaata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3301 aaacccagacttatgttcctatccagccgacaattttgaatcctaattcatctcaaaata 3360
Query: 361 cgttccagcgtcctgcggacccccctggtatatcacaaagcaccgcacaaagaattcaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3361 cgttccagcgtcctgcggacccccctggtatatcacaaagcaccgcacaaagaattcaga 3420
Query: 421 accaatctcttccaaactatggtgccccactgccgttgggtcagttgatgtcaccatcag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3421 accaatctcttccaaactatggtgccccactgccgttgggtcagttgatgtcaccatcag 3480
Query: 481 attcaatggcaagcaatcgagatcaactaccctcgggctcgagctcactcattccagata 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3481 attcaatggcaagcaatcgagatcaactaccctcgggctcgagctcactcattccagata 3540
Query: 541 gcagttcctcgattatagtgggcactggctcagatgggatttttggctctaatattggaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3541 gcagttcctcgattatagtgggcactggctcagatgggatttttggctctaatattggaa 3600
Query: 601 atagcgaaaacaacggattacttacgaacagtaaaaccacaccagttcttcaacatgcta 660
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 3601 atagcgaaaacaacggattacttacgaacagtaaaaccacaccagtacttcaacatgcta 3660
Query: 661 cgacgacctcggacattgcttcaggatcttcatccaatccaagtagcacccctagattcc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3661 cgacgacctcggacattgcttcaggatcttcatccaatccaagtagcacccctagattcc 3720
Query: 721 ctatagaagtggaacctgagacggataaattatcgctcttattttcggatcaagaatttg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3721 ctatagaagtggaacctgagacggataaattatcgctcttattttcggatcaagaatttg 3780
Query: 781 agatgttgatgcaattttccaaataggtaaggtgaaaaattcctaagccttaaattgtaa 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3781 agatgttgatgcaattttccaaataggtaaggtgaaaaattcctaagccttaaattgtaa 3840
Query: 841 cactatttcattgaatattataaacaaaaa 870
||||||||||||||||||||||||||||||
Sbjct: 3841 cactatttcattgaatattataaacaaaaa 3870
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6282
Number of Sequences: 1807
Number of extensions: 6282
Number of successful extensions: 39
Number of sequences better than 1.0e-20: 1
length of query: 870
length of database: 10,358,551
effective HSP length: 16
effective length of query: 854
effective length of database: 10,329,639
effective search space: 8821511706
effective search space used: 8821511706
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)